Research
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Research
research overview
My current professional objective is to excel in mass spectrometry applied to plant biology and in supervising, training of others in the academic environment. I aim to work as close to the cutting edge of mass spectrometry and to follow and implement new developments and tools in plant biology. In that context I aim to be productive and contribute to efforts in obtaining federal funding. So far, I have been co-PI on two research grants and one equipment grant sponsored by the National Science Foundation (NSF) and one research grant sponsored by the USDA.
keywords
mass spectrometry, plant biochemistry, plant biology
Publications
individual publications
academic article
Construction of plastid reference proteomes for maize and Arabidopsis and evaluation of their orthologous relationships; the concept of orthoproteomics. .
Journal of Proteomics Research .
2012
Nucleoid-enriched proteomes in developing plastids and chloroplasts from maize leaves; a new conceptual framework for nucleoid functions. .
Plant Physiology .
158:156-189.
2012
RIP1, a member of an Arabidopsis protein family,
interacts with the protein RARE1 and broadly
affects RNA editing .
Proceedings of the National Academy of Sciences of the United States of America .
109.
2012
The Purification of the Chlamydomonas reinhardtii chloroplast ClpP complex: additional subunits, domains and structural features .
Plant Molecular Biology .
80:189-202.
2012
The combined use of photoaffinity labeling and surface plasmonresonance-based technology identifies multiple salicylic acid-binding proteins. .
The Plant Journal .
72:1027-1038.
2012
APO1 promotes the splicing of chloroplast group II introns and
harbors a novel plant-specific RNA binding domain .
The Plant Cell .
23:1082-92.
2011
The workflow for quantitative proteome analysis of chloroplast development and differentiation, chloroplast mutants and protein interactions by spectral counting .
Methods Molecular Biology .
775:265-282.
2011
Reconstruction of metabolic pathways, protein expression and homeostasis machineries across maize bundle sheath and mesophyll chloroplasts; large scale quantitative proteomics using the first maize genome assembly .
Plant Physiology .
152:1219-1250.
2010
Structural and metabolic transitions of C4 leaf development and differentiation defined by microscopy and quantitative proteomics in maize .
The Plant Cell .
22:3509-3542.
2010
A plant-specific RNA binding domain revealed through analysis of chloroplast group II intron splicing .
Proceedings of the National Academy of Sciences of the United States of America .
106:4537-42.
2009
Large scale comparative proteomics of a chloroplast Clp protease mutant reveals folding stress, altered protein homeostasis, and feedback regulation of metabolism. .
Molecular Cellular Proteomics .
8:1789-1810.
2009
PPDB, the Plant Proteomics Database at Cornell .
Nucleic Acids Research .
37.
2009
A member of the Whirly family is a multifunctional RNA- and DNA-binding protein that is essential for chloroplast biogenesis .
Nucleic Acids Research .
16:5152-65.
2008
Immobilization of the first dimension in 2D blue native/SDS-PAGE allows the relative quantification of membrane proteomes .
Methods .
46:48-53.
2008
Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis thaliana .
Plant Physiology .
148:156-75.
2008
Sorting signals, N-terminal modifications and abundance of the chloroplast proteome .
PLOS One .
3.
2008
A Ribonuclease III Domain Protein Functions in Group II Intron Splicing in Maize Chloroplasts .
The Plant Cell .
19:2606-2623.
2007
A comprehensive analysis of the 14-3-3 interactome in barley leaves using a complementary proteomics and two-hybrid approach .
Plant Physiology .
143:670-83.
2007
Down-regulation of ClpR2 protease of A. thaliana leads to reduced accumulation of the ClpPRS complex and defects in chloroplast biogenesis .
The Plant Cell .
18:1704-1721.
2006
A scalable, GFP-based pipeline for membrane protein overexpression screening and purification .
Protein Science .
14:2011-2017.
2005
The chloroplast ClpP complex in Chlamydomonas reinhardtii contains an unusual high molecular mass subunit with a large apical domain .
FEBS Journal .
272:5558-5571.
2005
Clp protease complexes from photosynthetic and non-photosynthetic plastids and mitochondria of plants, their predicted 3-D structures and functional implications .
Journal of Biological Chemistry .
279:4768-4781.
2004
Constitutive expression of pea LHCb1.2 in tobacco affects plant development, morphology and photosynthetic capacity .
Plant Molecular Biology .
55:701-714.
2004
In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts; new proteins, new functions and a plastid proteome database .
Plant Cell .
16:478-499.
2004
Other
college
research keyword
mass spectrometry, plant biochemistry, plant biology
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